CDS

Accession Number TCMCG006C84965
gbkey CDS
Protein Id XP_013687385.1
Location complement(join(27489621..27489671,27489964..27490092,27490166..27490269,27490430..27490514,27490608..27490678,27490881..27490936,27491025..27491150,27491383..27491513,27491585..27491720,27491803..27491921,27492302..27492392,27492485..27492624,27492694..27492771,27493008..27493052,27493132..27493269,27493362..27493442,27493534..27493638,27493993..27494073,27494155..27494271,27494437..27494553,27494648..27494758,27494847..27494957,27495296..27495388,27495477..27495536,27495852..27495950,27496022..27496072,27496217..27496249,27496588..27496647,27496766..27496876,27496960..27497065,27497217..27497281,27497578..27497630,27497708..27497798,27501268..27501340,27501428..27501520,27501684..27501805,27501893..27501989,27502104..27502129))
Gene LOC106391306
GeneID 106391306
Organism Brassica napus

Protein

Length 1151aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013831931.2
Definition DNA-directed RNA polymerase III subunit 2 isoform X3 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGACTCAGTCACGAAGATCTAGACTTGACCAACGATGACCATTTCGTCGACAAGCAAAAGCTTTCAGCTCCTATCAAGTCAACAGCTGATAAGTTCCAGCTCGTTCCCGAGTTTTTGAAGGTGAGAGGACTTGTGAAGCAACACTTGGATTCATTCAATTACTTCATCAATGTCGGGATCAAAAAGATTGTTCGTGCAAATTCTCGTATTACATCCACTCTAGACCCATCGATTTATCTAAGGTTTAAGGATGTCAGAGTTGGTGAACCCTGTATTTTAAGCATTAGTATGGCGGAGAAACTCAATCCACACATGTGCCGATTAGCTGATATGACATATGCTGCTCCAATCTTTGTCGACATAGAATATGTTCATGGAAGTCATGGACAGACGACAATAAGTGCAAAGGATAACGTTATTATCGGAAGGATGCCTATTATGTTGCGGAGTTGCCGCTGTGTATTACATGGGAAAGATGAAGAGGAACTTGCAAGATTGGGTGAGTGCCCACTTGATCCTGGAGGATATTTTGTCATCAAAGGAACCGAGAAGGTCTTGTTGATACAAGAACAACTTTCGAAGAACAGAATCATTATTGATTGTGATAAAAAGGGGAACATAAATGCATCTGTCACAAGCAGCACTGAAATGACGAAAAGCAAAACAGTTATTCAGATGGATAAGGAGAAGATATATTTATTTCTACATCAATTTGTAAAAAAGATTCCAATTATAATCGTCCTCAAAGCTATGGGAATGGAGAGTGACCAAGAGATCGTACAAATGGTTGGAAGGGATCCCCGTTTTAGCGCATCACTACTACCCTCGATGGAGGAGTGTATTAGTGAAGGCGTGACTACACGACAAGAAGCACTGGACTATCTCGAGGCAAAGGTGAAGAAATCATCGTATGGACCTCCTGAAAAGGATGGCAAAGCTCTATACATTCTCAGAGCTTTATTCCTTGCACACGTACCTGTGCGTGACAACAATTATCGCCAAAAATGTTTCTATGTTGGGGTGATGTTGAGGCGAATGATTGAAGCAATGTTAAACAAAGATGCCATGGATGACAAGGATTATGTTGGTAACAAGCGGTTGGAGTTATCTGGGCAACTAATATCTCTTCTCTTTGAGGATTTGTTCAAAACAATGACCACTGAGGCCATTAAGAAAGTAGATGGTATCCTTCAAAAACCTACCCGGGCAAGCCGTTTTGATTTTTCACAATGTCTTACTGGAGAGAAGAATCATAATATTTCTTTTGGACTGGAAAGAACCCTTTCAACGGGAAACTTCGATATTAAAAGGTTCAGAATGCATAGGAAAGGCATGACACAGGTTTTAACAAGGTTATCTTTTATTGGGAGCATGGGGTTTATTACGAAAATTTCGCCACAGTTCGAAAAGTCTAGAAAAGTTAGTGGGCCTAGATCTTTGCAACCCAGCCAGTGGGGCATGCTCTGCCCATGTGATACCCCAGAAGGCGAAGCTTGTGGTCTTGTCAAGAACTTGGCGTTAATGACTCATGTTACAACGGATATAGAGGAAGGCCCATTGGTTGCTATGTGCTACAAATTGGGTGTCACAGATTTGGAAGTACTATCAGCAGAGGAGCTGCATACTCCAGACTCATTTTTGGTCATATTTAATGGGCTAATAATTGGCAAACATAGAAGGCCACAGTACTTCGCCAATTCTCTTAGAAGGCTGCGTAGAGCTGGGAAAATTGGGGAGTTCGTCAGTGTGTTCATAAACGAAAAGCAGCATTGTGTTTACGTTGCTTCTGATGGTGGGCGGGTGTGTCGTCCACTTGTTATAGTCGATAATGGAGTATCAAGAGTTAAACAATACCACATGAAGGAATTACAGGATGGTGTTCGCACTTTTGATGACTTTATTCGTGAAGGTTTGATCGAGTATCTTGATGTCAATGAGGAAAACAATGCATTGATTGCTTTATACGAAGGTAGGCCCAAGGAAATGAAAGGCACAACCCACATTGAGATTGAACCATTCACCATCTTAGGTGTTGTTGCTGGTCTTATCCCCTACCCTCACCATAATCAGTCACCTAGAAATACGTATCAGTGTGCTATGGGAAAACAAGCTATGGGAAATATTGCTTACAACCAGTTAAATCGGATGGACTCATTGCTTTACCTATTGGTGTATCCTCAACGACCTCTGTTGACAACAAGGACCATCGAATTGGTTGGATACGATAAACTTGGAGCAGGTCAAAATGCAACAGTTGCTGTTATGAGTAATACTGGATACGACATTGAGGATGCAATAGTGATGAACAAAGCTTCCTTGGATCGAGGTTTTGGCCGCTGCATTGTTATGAAAAAACTTGTTGCTGCTTGCCAGAAGTATGGTAACGATGCAGTAGACAGAATACTCAGGCCACAAAGAACAGGTCCAGACGCGGAAAAGATGCAGATACTGGATGATGATGGAATAGCATCTCCAGGGGAAATTATTAGACCGAATGATGTCTATATAAATAAGCAAGTCCCTGTGGACACAAGAAATAACATTACATCTCAGCAATCGGATAGTCAATATCGTCCGGCCAGAGAGTATTTTAAAGGTCCTGAAGGGGAAACGCAAGTGGTCGATAGAGTTGCTCTTTGTTCTGACAAGAACGGCAATTTATGCATAAAATATATCATCCGGCATACTCGTCGGCCAGAGCTTGGAGACAAGTTCAGCAGTAGGCATGGGCAGAAAGGTGTATGTGGTACAATCGTCCAGCAGGAAGATTTTCCATTTTCTGAGCGTGGAATTTGCCCTGATTTGATCATGAATCCTCATGGGTTTCCAAGTCGTATGACAGTAGGTAAGATGATAGAGCTACTTGGAAGTAAGGCTGGGGTGTCTTCAGGTAGATTTCATTATGGTAGTGCTTTTGGAGAACGAAGTGGTCACGCTGACAAGGTTGAGGCAATAAGTAAGACCCTTGTGAAGCATGGCTTTTCCTACAGTGGGAAGGACTTGTTATACTCAGGTCTCAGTGGTGAGCCATTACAGACATACGTCTTCATGGGGCCAATATATTATCAGAAACTGAAACATATGGTCCTGGACAAAATGCATGCACGAGGGAGTGGACCCCGTGTGATGATGACAAGACAGCCAACTGAAGGGAAATCCAAAAATGGAGGTTTACGAGTGGGAGAGATGGAACGAGATTGCCTTATTGCTTATGGAGCGAGCATGTTGATCTATGAGCGGCTCATGCTTTCTAGTGATCCTTTTGAAGTTCAGGTTTGTAGAGCTTGCGGTTTATTGGGATATTACGATTACAAGCTGAAGAAAGCAGTTTGTTCAACATGTAAGAATGGTGATAGCATTGCTACTATGAAACTCCCTTACGCATGCAAGCTCCTCTTCCAGGAACTCCAGTCGATGAATGTTGTTCCCCGTCTGAAACTCGTGGAGTCTTGA
Protein:  
MGLSHEDLDLTNDDHFVDKQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVRANSRITSTLDPSIYLRFKDVRVGEPCILSISMAEKLNPHMCRLADMTYAAPIFVDIEYVHGSHGQTTISAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDCDKKGNINASVTSSTEMTKSKTVIQMDKEKIYLFLHQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSMEECISEGVTTRQEALDYLEAKVKKSSYGPPEKDGKALYILRALFLAHVPVRDNNYRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTTEAIKKVDGILQKPTRASRFDFSQCLTGEKNHNISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDIEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGLIIGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIVDNGVSRVKQYHMKELQDGVRTFDDFIREGLIEYLDVNEENNALIALYEGRPKEMKGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFGRCIVMKKLVAACQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYINKQVPVDTRNNITSQQSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGERSGHADKVEAISKTLVKHGFSYSGKDLLYSGLSGEPLQTYVFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCRACGLLGYYDYKLKKAVCSTCKNGDSIATMKLPYACKLLFQELQSMNVVPRLKLVES